Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.33■□□□□ 0.53
Rp1l1Q8CGM2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rp1l1Q8CGM2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1l1Q8CGM2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1l1Q8CGM2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rp1l1Q8CGM2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rp1l1Q8CGM2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rp1l1Q8CGM2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rp1l1Q8CGM2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Gm12895-201ENSMUST00000122214 226 ntBASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rp1l1Q8CGM2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rp1l1Q8CGM2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 Gm11452-201ENSMUST00000122376 690 ntBASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 Gm2651-201ENSMUST00000203560 838 ntBASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 Gm18206-201ENSMUST00000207027 926 ntBASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.27■□□□□ 0.52
Rp1l1Q8CGM2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rp1l1Q8CGM2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms