Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.71■■□□□ 1.07
Smc4Q8CG47 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.71■■□□□ 1.07
Smc4Q8CG47 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.71■■□□□ 1.07
Smc4Q8CG47 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.71■■□□□ 1.07
Smc4Q8CG47 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Smc4Q8CG47 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Gm7977-201ENSMUST00000193787 748 ntBASIC21.7■■□□□ 1.06
Smc4Q8CG47 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.7■■□□□ 1.06
Smc4Q8CG47 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smc4Q8CG47 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smc4Q8CG47 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Gm24841-201ENSMUST00000158676 357 ntBASIC21.69■■□□□ 1.06
Smc4Q8CG47 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc4Q8CG47 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.69■■□□□ 1.06
Smc4Q8CG47 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc4Q8CG47 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Smc4Q8CG47 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc4Q8CG47 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Smc4Q8CG47 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smc4Q8CG47 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.66■■□□□ 1.06
Smc4Q8CG47 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smc4Q8CG47 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
Smc4Q8CG47 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Dmtn-210ENSMUST00000228824 2377 ntBASIC21.65■■□□□ 1.06
Smc4Q8CG47 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Smc4Q8CG47 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Gm45141-201ENSMUST00000206502 1888 ntBASIC21.64■■□□□ 1.06
Smc4Q8CG47 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Smc4Q8CG47 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Gm10231-201ENSMUST00000181584 441 ntBASIC21.64■■□□□ 1.05
Smc4Q8CG47 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Smc4Q8CG47 Gm7889-201ENSMUST00000185591 958 ntBASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms