Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Gm29791-202ENSMUST00000207888 369 ntBASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.89■□□□□ 0.61
Polr2bQ8CFI7 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.88■□□□□ 0.61
Polr2bQ8CFI7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.87■□□□□ 0.61
Polr2bQ8CFI7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Gm10418-201ENSMUST00000100943 576 ntBASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Polr2bQ8CFI7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Polr2bQ8CFI7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2bQ8CFI7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Polr2bQ8CFI7 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2bQ8CFI7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Polr2bQ8CFI7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms