Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc38Q8CDN8 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc38Q8CDN8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Mtag2-201ENSMUST00000058665 714 ntBASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc38Q8CDN8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc38Q8CDN8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc38Q8CDN8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ccdc38Q8CDN8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
Ccdc38Q8CDN8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc38Q8CDN8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gm2559-201ENSMUST00000201323 363 ntBASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Dio3-201ENSMUST00000097228 1449 ntBASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc38Q8CDN8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Gm4968-201ENSMUST00000071458 858 ntBASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc38Q8CDN8 Haglr-201ENSMUST00000100000 2085 ntBASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc38Q8CDN8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms