Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Vcpip1Q8CDG3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Rab3c-203ENSMUST00000224180 967 ntBASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vcpip1Q8CDG3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vcpip1Q8CDG3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vcpip1Q8CDG3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Gm4968-201ENSMUST00000071458 858 ntBASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vcpip1Q8CDG3 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vcpip1Q8CDG3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms