Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prpf31Q8CCF0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Gm43799-201ENSMUST00000201845 579 ntBASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prpf31Q8CCF0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prpf31Q8CCF0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prpf31Q8CCF0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prpf31Q8CCF0 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Gm38027-201ENSMUST00000192315 235 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Gm9987-201ENSMUST00000069768 567 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Idnk-204ENSMUST00000226010 1898 ntBASIC19.2■□□□□ 0.66
Prpf31Q8CCF0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms