Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slc46a2Q8CA03 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slc46a2Q8CA03 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Gm13234-201ENSMUST00000120010 747 ntBASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slc46a2Q8CA03 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Mir8112-201ENSMUST00000184382 131 ntBASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Slc46a2Q8CA03 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slc46a2Q8CA03 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.89■□□□□ 0.3
Slc46a2Q8CA03 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Slc46a2Q8CA03 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Gm5874-201ENSMUST00000096101 508 ntBASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc46a2Q8CA03 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc46a2Q8CA03 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc46a2Q8CA03 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc46a2Q8CA03 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms