Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 Gm29791-202ENSMUST00000207888 369 ntBASIC16.52■□□□□ 0.24
Ska3Q8C263 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ska3Q8C263 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ska3Q8C263 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ska3Q8C263 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ska3Q8C263 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ska3Q8C263 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Ska3Q8C263 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.51■□□□□ 0.23
Ska3Q8C263 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ska3Q8C263 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ska3Q8C263 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.51■□□□□ 0.23
Ska3Q8C263 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ska3Q8C263 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Ska3Q8C263 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.5■□□□□ 0.23
Ska3Q8C263 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Gm10698-201ENSMUST00000182663 604 ntBASIC16.5■□□□□ 0.23
Ska3Q8C263 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.5■□□□□ 0.23
Ska3Q8C263 Gm42545-201ENSMUST00000202755 922 ntBASIC16.5■□□□□ 0.23
Ska3Q8C263 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Ska3Q8C263 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Ska3Q8C263 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ska3Q8C263 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ska3Q8C263 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.49■□□□□ 0.23
Ska3Q8C263 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ska3Q8C263 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.49■□□□□ 0.23
Ska3Q8C263 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.49■□□□□ 0.23
Ska3Q8C263 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Ska3Q8C263 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ska3Q8C263 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.49■□□□□ 0.23
Ska3Q8C263 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ska3Q8C263 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.48■□□□□ 0.23
Ska3Q8C263 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ska3Q8C263 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.48■□□□□ 0.23
Ska3Q8C263 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ska3Q8C263 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms