Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cps1Q8C196 Ighv6-1-201ENSMUST00000193612 343 ntBASIC23.79■■□□□ 1.4
Cps1Q8C196 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC23.78■■□□□ 1.4
Cps1Q8C196 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC23.78■■□□□ 1.4
Cps1Q8C196 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC23.78■■□□□ 1.4
Cps1Q8C196 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC23.78■■□□□ 1.4
Cps1Q8C196 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC23.78■■□□□ 1.4
Cps1Q8C196 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cps1Q8C196 Idnk-204ENSMUST00000226010 1898 ntBASIC23.78■■□□□ 1.4
Cps1Q8C196 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cps1Q8C196 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cps1Q8C196 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cps1Q8C196 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Cps1Q8C196 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Cps1Q8C196 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Cps1Q8C196 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.77■■□□□ 1.39
Cps1Q8C196 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cps1Q8C196 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC23.76■■□□□ 1.39
Cps1Q8C196 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cps1Q8C196 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Cps1Q8C196 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
Cps1Q8C196 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cps1Q8C196 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cps1Q8C196 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cps1Q8C196 Gm43272-201ENSMUST00000200599 1584 ntBASIC23.76■■□□□ 1.39
Cps1Q8C196 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Cps1Q8C196 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC23.75■■□□□ 1.39
Cps1Q8C196 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cps1Q8C196 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
Cps1Q8C196 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
Cps1Q8C196 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC23.74■■□□□ 1.39
Cps1Q8C196 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Cps1Q8C196 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 AC125350.1-201ENSMUST00000225115 903 ntBASIC23.74■■□□□ 1.39
Cps1Q8C196 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cps1Q8C196 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC23.73■■□□□ 1.39
Cps1Q8C196 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC23.73■■□□□ 1.39
Cps1Q8C196 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC23.73■■□□□ 1.39
Cps1Q8C196 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cps1Q8C196 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cps1Q8C196 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.72■■□□□ 1.39
Cps1Q8C196 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cps1Q8C196 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC23.72■■□□□ 1.39
Cps1Q8C196 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cps1Q8C196 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cps1Q8C196 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Cps1Q8C196 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cps1Q8C196 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cps1Q8C196 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cps1Q8C196 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cps1Q8C196 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cps1Q8C196 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Cps1Q8C196 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Cps1Q8C196 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Cps1Q8C196 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cps1Q8C196 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Cps1Q8C196 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
Cps1Q8C196 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC23.7■■□□□ 1.38
Cps1Q8C196 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cps1Q8C196 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Cps1Q8C196 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cps1Q8C196 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cps1Q8C196 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC23.69■■□□□ 1.38
Cps1Q8C196 Gm27459-201ENSMUST00000184860 107 ntBASIC23.69■■□□□ 1.38
Cps1Q8C196 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC23.69■■□□□ 1.38
Cps1Q8C196 AC122351.1-201ENSMUST00000220467 126 ntBASIC23.69■■□□□ 1.38
Cps1Q8C196 AC124569.2-201ENSMUST00000225998 818 ntBASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms