Protein–RNA interactions for Protein: Q8C0J2

Atg16l1, Autophagy-related protein 16-1, mousemouse

Predictions only

Length 607 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg16l1Q8C0J2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg16l1Q8C0J2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Atg16l1Q8C0J2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Atg16l1Q8C0J2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Gm9988-201ENSMUST00000069786 435 ntBASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Atg16l1Q8C0J2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Atg16l1Q8C0J2 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Atg16l1Q8C0J2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Atg16l1Q8C0J2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.56■□□□□ 0.4
Atg16l1Q8C0J2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Reep4-203ENSMUST00000226563 1444 ntBASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg16l1Q8C0J2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg16l1Q8C0J2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms