Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.84■□□□□ 0.45
Sh3rf2Q8BZT2 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf2Q8BZT2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf2Q8BZT2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf2Q8BZT2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sh3rf2Q8BZT2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf2Q8BZT2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Sh3rf2Q8BZT2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf2Q8BZT2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sh3rf2Q8BZT2 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Sh3rf2Q8BZT2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Gm7638-201ENSMUST00000121348 967 ntBASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sh3rf2Q8BZT2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sh3rf2Q8BZT2 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm6659-201ENSMUST00000174752 547 ntBASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sh3rf2Q8BZT2 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sh3rf2Q8BZT2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Gm7791-201ENSMUST00000219066 539 ntBASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sh3rf2Q8BZT2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms