Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trerf1Q8BXJ2 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trerf1Q8BXJ2 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Gm37856-201ENSMUST00000191634 999 ntBASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trerf1Q8BXJ2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trerf1Q8BXJ2 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Haglr-201ENSMUST00000100000 2085 ntBASIC18.45■□□□□ 0.54
Trerf1Q8BXJ2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Gm2559-201ENSMUST00000201323 363 ntBASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trerf1Q8BXJ2 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.43■□□□□ 0.54
Trerf1Q8BXJ2 Gm12896-201ENSMUST00000118430 226 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms