Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cc2d1bQ8BRN9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Gm2559-201ENSMUST00000201323 363 ntBASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Gm4968-201ENSMUST00000071458 858 ntBASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cc2d1bQ8BRN9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
Cc2d1bQ8BRN9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cc2d1bQ8BRN9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Gm8969-201ENSMUST00000199694 526 ntBASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cc2d1bQ8BRN9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms