Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Scfd1Q8BRF7 Gm16061-201ENSMUST00000122167 857 ntBASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Il3ra-202ENSMUST00000223589 738 ntBASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Scfd1Q8BRF7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Gm10013-201ENSMUST00000106074 672 ntBASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Scfd1Q8BRF7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Mir8112-201ENSMUST00000184382 131 ntBASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.1■□□□□ 0.81
Scfd1Q8BRF7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.09■□□□□ 0.81
Scfd1Q8BRF7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Gm13474-201ENSMUST00000122466 815 ntBASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Scfd1Q8BRF7 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.08■□□□□ 0.8
Scfd1Q8BRF7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scfd1Q8BRF7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scfd1Q8BRF7 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms