Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Rab11fip4Q8BQP8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rab11fip4Q8BQP8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.46■□□□□ 0.71
Rab11fip4Q8BQP8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab11fip4Q8BQP8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab11fip4Q8BQP8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab11fip4Q8BQP8 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Mir1199-201ENSMUST00000117015 119 ntBASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Alkbh1-212ENSMUST00000185301 408 ntBASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab11fip4Q8BQP8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab11fip4Q8BQP8 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rab11fip4Q8BQP8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms