Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Gm42778-201ENSMUST00000199644 553 ntBASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf18Q8BM39 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Tgds-204ENSMUST00000228543 1594 ntBASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Reep4-203ENSMUST00000226563 1444 ntBASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf18Q8BM39 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Gm13146-201ENSMUST00000118508 780 ntBASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Gm13234-201ENSMUST00000120010 747 ntBASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf18Q8BM39 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Gm10493-201ENSMUST00000097270 612 ntBASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf18Q8BM39 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.71■□□□□ 0.27
Prpf18Q8BM39 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.71■□□□□ 0.27
Prpf18Q8BM39 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Prpf18Q8BM39 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf18Q8BM39 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf18Q8BM39 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Prpf18Q8BM39 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Prpf18Q8BM39 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms