Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Rnf38Q8BI21 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Rnf38Q8BI21 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Gm37179-201ENSMUST00000194862 823 ntBASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Rnf38Q8BI21 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.94■□□□□ 0.3
Rnf38Q8BI21 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Rnf38Q8BI21 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rnf38Q8BI21 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf38Q8BI21 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms