Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Gm7638-201ENSMUST00000121348 967 ntBASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Gm16061-201ENSMUST00000122167 857 ntBASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.5■□□□□ 0.55
Nod1Q8BHB0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Nod1Q8BHB0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nod1Q8BHB0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nod1Q8BHB0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gm13401-201ENSMUST00000117074 291 ntBASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gm24841-201ENSMUST00000158676 357 ntBASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gm7791-201ENSMUST00000219066 539 ntBASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Nod1Q8BHB0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Tgds-204ENSMUST00000228543 1594 ntBASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Nod1Q8BHB0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
Nod1Q8BHB0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nod1Q8BHB0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Nod1Q8BHB0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Gm13474-201ENSMUST00000122466 815 ntBASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Gm25016-201ENSMUST00000158399 131 ntBASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Gm29791-202ENSMUST00000207888 369 ntBASIC18.45■□□□□ 0.54
Nod1Q8BHB0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nod1Q8BHB0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms