Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim23Q8BGX0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.96■□□□□ 0.31
Trim23Q8BGX0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Odf3b-204ENSMUST00000227834 930 ntBASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim23Q8BGX0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Trim23Q8BGX0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim23Q8BGX0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim23Q8BGX0 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim23Q8BGX0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Timm23-208ENSMUST00000226683 750 ntBASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim23Q8BGX0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Mir8112-201ENSMUST00000184382 131 ntBASIC16.93■□□□□ 0.3
Trim23Q8BGX0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim23Q8BGX0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Gm37055-201ENSMUST00000191866 133 ntBASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim23Q8BGX0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim23Q8BGX0 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms