Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npas4Q8BGD7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Npas4Q8BGD7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Npas4Q8BGD7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Gm17971-201ENSMUST00000190239 806 ntBASIC18.52■□□□□ 0.56
Npas4Q8BGD7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Npas4Q8BGD7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Npas4Q8BGD7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Npas4Q8BGD7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npas4Q8BGD7 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Npas4Q8BGD7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Npas4Q8BGD7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Gm17807-201ENSMUST00000186869 298 ntBASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.5■□□□□ 0.55
Npas4Q8BGD7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Gm26039-201ENSMUST00000158152 144 ntBASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Npas4Q8BGD7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Npas4Q8BGD7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms