Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lrrtm4Q80XG9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Gm21814-202ENSMUST00000203277 873 ntBASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Odf3b-204ENSMUST00000227834 930 ntBASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Gm5417-201ENSMUST00000079706 384 ntBASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lrrtm4Q80XG9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lrrtm4Q80XG9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lrrtm4Q80XG9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Gm12085-201ENSMUST00000119263 940 ntBASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lrrtm4Q80XG9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.09■□□□□ 0.33
Lrrtm4Q80XG9 Gm3375-201ENSMUST00000203929 796 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms