Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp6nlQ80XC3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Golph3-205ENSMUST00000228671 2842 ntBASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp6nlQ80XC3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp6nlQ80XC3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp6nlQ80XC3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Usp6nlQ80XC3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Usp6nlQ80XC3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp6nlQ80XC3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Gm27704-201ENSMUST00000185094 107 ntBASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Gm9731-201ENSMUST00000209480 747 ntBASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp6nlQ80XC3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Gm9013-201ENSMUST00000132939 882 ntBASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Gm37025-201ENSMUST00000195159 829 ntBASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp6nlQ80XC3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp6nlQ80XC3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Gm29518-201ENSMUST00000190858 372 ntBASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp6nlQ80XC3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 Gm7213-201ENSMUST00000215977 950 ntBASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp6nlQ80XC3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms