Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccdc116Q80X53 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccdc116Q80X53 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.21■□□□□ 0.34
Ccdc116Q80X53 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ccdc116Q80X53 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc116Q80X53 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc116Q80X53 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Gm27275-201ENSMUST00000184318 272 ntBASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc116Q80X53 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc116Q80X53 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms