Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17■□□□□ 0.31
Trim36Q80WG7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim36Q80WG7 Gm5898-201ENSMUST00000121016 2071 ntBASIC17■□□□□ 0.31
Trim36Q80WG7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.99■□□□□ 0.31
Trim36Q80WG7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trim36Q80WG7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Trim36Q80WG7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Tgds-204ENSMUST00000228543 1594 ntBASIC16.98■□□□□ 0.31
Trim36Q80WG7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trim36Q80WG7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trim36Q80WG7 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trim36Q80WG7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim36Q80WG7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Trim36Q80WG7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
Trim36Q80WG7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
Trim36Q80WG7 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.95■□□□□ 0.3
Trim36Q80WG7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Gm20049-201ENSMUST00000219950 730 ntBASIC16.95■□□□□ 0.3
Trim36Q80WG7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.95■□□□□ 0.3
Trim36Q80WG7 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim36Q80WG7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim36Q80WG7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms