Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trim62Q80V85 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.21■□□□□ 0.51
Trim62Q80V85 Timm23-208ENSMUST00000226683 750 ntBASIC18.21■□□□□ 0.51
Trim62Q80V85 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Trim62Q80V85 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim62Q80V85 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Trim62Q80V85 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Trim62Q80V85 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trim62Q80V85 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim62Q80V85 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.2■□□□□ 0.5
Trim62Q80V85 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim62Q80V85 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.2■□□□□ 0.5
Trim62Q80V85 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trim62Q80V85 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.19■□□□□ 0.5
Trim62Q80V85 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trim62Q80V85 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.19■□□□□ 0.5
Trim62Q80V85 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.18■□□□□ 0.5
Trim62Q80V85 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.18■□□□□ 0.5
Trim62Q80V85 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim62Q80V85 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Trim62Q80V85 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.18■□□□□ 0.5
Trim62Q80V85 Odf3b-204ENSMUST00000227834 930 ntBASIC18.18■□□□□ 0.5
Trim62Q80V85 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trim62Q80V85 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim62Q80V85 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim62Q80V85 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim62Q80V85 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.17■□□□□ 0.5
Trim62Q80V85 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.17■□□□□ 0.5
Trim62Q80V85 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Trim62Q80V85 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.17■□□□□ 0.5
Trim62Q80V85 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.17■□□□□ 0.5
Trim62Q80V85 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Trim62Q80V85 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Trim62Q80V85 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
Trim62Q80V85 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trim62Q80V85 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Trim62Q80V85 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim62Q80V85 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Trim62Q80V85 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.16■□□□□ 0.5
Trim62Q80V85 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Trim62Q80V85 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.16■□□□□ 0.5
Trim62Q80V85 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms