Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdh19Q80TF3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdh19Q80TF3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdh19Q80TF3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Pcdh19Q80TF3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh19Q80TF3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdh19Q80TF3 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Gm12085-201ENSMUST00000119263 940 ntBASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Gm9987-201ENSMUST00000069768 567 ntBASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdh19Q80TF3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh19Q80TF3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Gm27463-201ENSMUST00000183569 57 ntBASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh19Q80TF3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh19Q80TF3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms