Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
Prpf38bQ80SY5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38bQ80SY5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Prpf38bQ80SY5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf38bQ80SY5 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Prpf38bQ80SY5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gm45058-201ENSMUST00000205810 766 ntBASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf38bQ80SY5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf38bQ80SY5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Gm25016-201ENSMUST00000158399 131 ntBASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf38bQ80SY5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf38bQ80SY5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf38bQ80SY5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Prpf38bQ80SY5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms