Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pif1Q80SX8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pif1Q80SX8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Pif1Q80SX8 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Gm10013-201ENSMUST00000106074 672 ntBASIC16.2■□□□□ 0.18
Pif1Q80SX8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Gm2274-201ENSMUST00000184539 609 ntBASIC16.2■□□□□ 0.18
Pif1Q80SX8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Pif1Q80SX8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.2■□□□□ 0.18
Pif1Q80SX8 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.2■□□□□ 0.18
Pif1Q80SX8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pif1Q80SX8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Mir5130-201ENSMUST00000175160 84 ntBASIC16.19■□□□□ 0.18
Pif1Q80SX8 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.19■□□□□ 0.18
Pif1Q80SX8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Gm18032-201ENSMUST00000222541 538 ntBASIC16.19■□□□□ 0.18
Pif1Q80SX8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pif1Q80SX8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.18■□□□□ 0.18
Pif1Q80SX8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pif1Q80SX8 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 AA414768-201ENSMUST00000121924 1257 ntBASIC16.17■□□□□ 0.18
Pif1Q80SX8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.17■□□□□ 0.18
Pif1Q80SX8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Pif1Q80SX8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
Pif1Q80SX8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.16■□□□□ 0.18
Pif1Q80SX8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pif1Q80SX8 Gm4974-201ENSMUST00000209974 875 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms