Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh8Q7TSK3 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh8Q7TSK3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh8Q7TSK3 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Mir2861-201ENSMUST00000175539 82 ntBASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh8Q7TSK3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh8Q7TSK3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh8Q7TSK3 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.33■□□□□ 0.36
Pcdh8Q7TSK3 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdh8Q7TSK3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms