Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.35□□□□□ -0.11
Vma21Q78T54 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.35□□□□□ -0.11
Vma21Q78T54 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vma21Q78T54 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.34□□□□□ -0.11
Vma21Q78T54 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.34□□□□□ -0.11
Vma21Q78T54 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.34□□□□□ -0.11
Vma21Q78T54 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Vma21Q78T54 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vma21Q78T54 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Vma21Q78T54 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vma21Q78T54 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Vma21Q78T54 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Vma21Q78T54 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vma21Q78T54 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vma21Q78T54 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vma21Q78T54 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.33□□□□□ -0.12
Vma21Q78T54 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.33□□□□□ -0.12
Vma21Q78T54 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Vma21Q78T54 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.33□□□□□ -0.12
Vma21Q78T54 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Idnk-204ENSMUST00000226010 1898 ntBASIC14.33□□□□□ -0.12
Vma21Q78T54 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vma21Q78T54 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Gm5898-201ENSMUST00000121016 2071 ntBASIC14.32□□□□□ -0.12
Vma21Q78T54 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Gm10033-202ENSMUST00000211874 928 ntBASIC14.32□□□□□ -0.12
Vma21Q78T54 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Vma21Q78T54 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vma21Q78T54 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Gm42642-201ENSMUST00000200683 355 ntBASIC14.31□□□□□ -0.12
Vma21Q78T54 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.31□□□□□ -0.12
Vma21Q78T54 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vma21Q78T54 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.31□□□□□ -0.12
Vma21Q78T54 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms