Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.16■□□□□ 0.66
Snd1Q78PY7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Snd1Q78PY7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.15■□□□□ 0.66
Snd1Q78PY7 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Snd1Q78PY7 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snd1Q78PY7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snd1Q78PY7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Snd1Q78PY7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Gm45412-201ENSMUST00000210217 2275 ntBASIC19.14■□□□□ 0.65
Snd1Q78PY7 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Snd1Q78PY7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Nespas-201ENSMUST00000143738 1083 ntBASIC19.13■□□□□ 0.65
Snd1Q78PY7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Snd1Q78PY7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Snd1Q78PY7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Snd1Q78PY7 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.12■□□□□ 0.65
Snd1Q78PY7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.11■□□□□ 0.65
Snd1Q78PY7 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Snd1Q78PY7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms