Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Timd4Q6U7R4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.34■□□□□ 0.21
Timd4Q6U7R4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Timd4Q6U7R4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Timd4Q6U7R4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Timd4Q6U7R4 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.31■□□□□ 0.2
Timd4Q6U7R4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Timd4Q6U7R4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Gm13401-201ENSMUST00000117074 291 ntBASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Timd4Q6U7R4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms