Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.12■□□□□ 0.97
Npc1l1Q6T3U4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Gm4974-201ENSMUST00000209974 875 ntBASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Npc1l1Q6T3U4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Npc1l1Q6T3U4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Gm7367-201ENSMUST00000057611 492 ntBASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
Npc1l1Q6T3U4 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Npc1l1Q6T3U4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1l1Q6T3U4 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Npc1l1Q6T3U4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1l1Q6T3U4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1l1Q6T3U4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Npc1l1Q6T3U4 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Npc1l1Q6T3U4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Gm38027-201ENSMUST00000192315 235 ntBASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Npc1l1Q6T3U4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.05■□□□□ 0.96
Npc1l1Q6T3U4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms