Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.7■□□□□ 0.74
Abcf1Q6P542 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Abcf1Q6P542 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.69■□□□□ 0.74
Abcf1Q6P542 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Abcf1Q6P542 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.68■□□□□ 0.74
Abcf1Q6P542 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Gm6211-202ENSMUST00000167849 925 ntBASIC19.68■□□□□ 0.74
Abcf1Q6P542 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.68■□□□□ 0.74
Abcf1Q6P542 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.68■□□□□ 0.74
Abcf1Q6P542 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Abcf1Q6P542 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Abcf1Q6P542 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Gm5408-201ENSMUST00000197998 747 ntBASIC19.66■□□□□ 0.74
Abcf1Q6P542 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.66■□□□□ 0.74
Abcf1Q6P542 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.66■□□□□ 0.74
Abcf1Q6P542 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.66■□□□□ 0.74
Abcf1Q6P542 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Abcf1Q6P542 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.64■□□□□ 0.74
Abcf1Q6P542 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abcf1Q6P542 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abcf1Q6P542 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Abcf1Q6P542 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Gm13148-201ENSMUST00000118892 745 ntBASIC19.64■□□□□ 0.73
Abcf1Q6P542 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.64■□□□□ 0.73
Abcf1Q6P542 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.64■□□□□ 0.73
Abcf1Q6P542 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Abcf1Q6P542 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms