Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtl3Q6P1Y1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Gm11643-201ENSMUST00000119578 864 ntBASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtl3Q6P1Y1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.17■□□□□ 0.5
Rtl3Q6P1Y1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtl3Q6P1Y1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Idnk-204ENSMUST00000226010 1898 ntBASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtl3Q6P1Y1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtl3Q6P1Y1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rtl3Q6P1Y1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl3Q6P1Y1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl3Q6P1Y1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl3Q6P1Y1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtl3Q6P1Y1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms