Protein–RNA interactions for Protein: Q6NZK8

Ptpdc1, Protein tyrosine phosphatase domain-containing protein 1, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpdc1Q6NZK8 Gm6576-201ENSMUST00000169678 883 ntBASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Ptpdc1Q6NZK8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Gm37292-201ENSMUST00000192062 758 ntBASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ptpdc1Q6NZK8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Gm20760-201ENSMUST00000179197 648 ntBASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ptpdc1Q6NZK8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Gm10698-201ENSMUST00000182663 604 ntBASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ptpdc1Q6NZK8 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ptpdc1Q6NZK8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Gm43272-201ENSMUST00000200599 1584 ntBASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ptpdc1Q6NZK8 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Gm43183-201ENSMUST00000200632 547 ntBASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ptpdc1Q6NZK8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC21.33■■□□□ 1
Ptpdc1Q6NZK8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ptpdc1Q6NZK8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Ptpdc1Q6NZK8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC21.32■■□□□ 1
Ptpdc1Q6NZK8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Gm27011-201ENSMUST00000182352 972 ntBASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ptpdc1Q6NZK8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ptpdc1Q6NZK8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms