Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.89■□□□□ 0.93
Best3Q6H1V1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Gm37722-201ENSMUST00000193757 208 ntBASIC20.88■□□□□ 0.93
Best3Q6H1V1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.88■□□□□ 0.93
Best3Q6H1V1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Idnk-204ENSMUST00000226010 1898 ntBASIC20.88■□□□□ 0.93
Best3Q6H1V1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.88■□□□□ 0.93
Best3Q6H1V1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Golph3-205ENSMUST00000228671 2842 ntBASIC20.87■□□□□ 0.93
Best3Q6H1V1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.87■□□□□ 0.93
Best3Q6H1V1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.87■□□□□ 0.93
Best3Q6H1V1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Best3Q6H1V1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.86■□□□□ 0.93
Best3Q6H1V1 Gm7153-201ENSMUST00000117092 455 ntBASIC20.86■□□□□ 0.93
Best3Q6H1V1 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Gm27742-201ENSMUST00000184667 60 ntBASIC20.86■□□□□ 0.93
Best3Q6H1V1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Best3Q6H1V1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Mir770-201ENSMUST00000103252 94 ntBASIC20.85■□□□□ 0.93
Best3Q6H1V1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.85■□□□□ 0.93
Best3Q6H1V1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.85■□□□□ 0.93
Best3Q6H1V1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Best3Q6H1V1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Mir3081-201ENSMUST00000175305 84 ntBASIC20.84■□□□□ 0.93
Best3Q6H1V1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Best3Q6H1V1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Best3Q6H1V1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.83■□□□□ 0.93
Best3Q6H1V1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Best3Q6H1V1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Gm6623-201ENSMUST00000173570 544 ntBASIC20.83■□□□□ 0.93
Best3Q6H1V1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Best3Q6H1V1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Best3Q6H1V1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Best3Q6H1V1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Best3Q6H1V1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Best3Q6H1V1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC20.83■□□□□ 0.92
Best3Q6H1V1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Best3Q6H1V1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms