Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.66■□□□□ 0.26
AtmQ62388 Gm43438-201ENSMUST00000198133 379 ntBASIC16.66■□□□□ 0.26
AtmQ62388 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.66■□□□□ 0.26
AtmQ62388 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AtmQ62388 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
AtmQ62388 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
AtmQ62388 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.65■□□□□ 0.26
AtmQ62388 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AtmQ62388 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.65■□□□□ 0.26
AtmQ62388 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
AtmQ62388 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.65■□□□□ 0.26
AtmQ62388 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AtmQ62388 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
AtmQ62388 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
AtmQ62388 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Gm11355-201ENSMUST00000121120 306 ntBASIC16.64■□□□□ 0.25
AtmQ62388 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.64■□□□□ 0.25
AtmQ62388 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
AtmQ62388 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.64■□□□□ 0.25
AtmQ62388 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
AtmQ62388 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.64■□□□□ 0.25
AtmQ62388 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.64■□□□□ 0.25
AtmQ62388 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.63■□□□□ 0.25
AtmQ62388 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AtmQ62388 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.63■□□□□ 0.25
AtmQ62388 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.63■□□□□ 0.25
AtmQ62388 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
AtmQ62388 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
AtmQ62388 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AtmQ62388 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.63■□□□□ 0.25
AtmQ62388 Il3ra-202ENSMUST00000223589 738 ntBASIC16.63■□□□□ 0.25
AtmQ62388 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
AtmQ62388 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
AtmQ62388 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
AtmQ62388 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.62■□□□□ 0.25
AtmQ62388 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
AtmQ62388 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.62■□□□□ 0.25
AtmQ62388 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.62■□□□□ 0.25
AtmQ62388 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.62■□□□□ 0.25
AtmQ62388 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
AtmQ62388 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
AtmQ62388 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
AtmQ62388 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.61■□□□□ 0.25
AtmQ62388 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
AtmQ62388 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Mir770-201ENSMUST00000103252 94 ntBASIC16.61■□□□□ 0.25
AtmQ62388 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.61■□□□□ 0.25
AtmQ62388 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.61■□□□□ 0.25
AtmQ62388 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
AtmQ62388 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms