Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Six1Q62231 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Six1Q62231 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Six1Q62231 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Gm8495-201ENSMUST00000188740 694 ntBASIC18.05■□□□□ 0.48
Six1Q62231 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.05■□□□□ 0.48
Six1Q62231 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Six1Q62231 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Six1Q62231 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Mir5133-201ENSMUST00000174955 77 ntBASIC18.04■□□□□ 0.48
Six1Q62231 Gm27405-201ENSMUST00000184201 112 ntBASIC18.04■□□□□ 0.48
Six1Q62231 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.04■□□□□ 0.48
Six1Q62231 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.04■□□□□ 0.48
Six1Q62231 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Six1Q62231 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.04■□□□□ 0.48
Six1Q62231 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.04■□□□□ 0.48
Six1Q62231 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Six1Q62231 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Six1Q62231 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Six1Q62231 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Six1Q62231 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.03■□□□□ 0.48
Six1Q62231 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.03■□□□□ 0.48
Six1Q62231 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.03■□□□□ 0.48
Six1Q62231 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.03■□□□□ 0.48
Six1Q62231 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.03■□□□□ 0.48
Six1Q62231 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Six1Q62231 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Six1Q62231 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Six1Q62231 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Six1Q62231 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Six1Q62231 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.02■□□□□ 0.48
Six1Q62231 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.02■□□□□ 0.48
Six1Q62231 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.02■□□□□ 0.48
Six1Q62231 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Six1Q62231 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Six1Q62231 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six1Q62231 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six1Q62231 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Six1Q62231 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Six1Q62231 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Six1Q62231 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.01■□□□□ 0.47
Six1Q62231 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Six1Q62231 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.01■□□□□ 0.47
Six1Q62231 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Six1Q62231 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms