Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scn9aQ62205 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scn9aQ62205 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Mir8098-201ENSMUST00000184011 137 ntBASIC20.79■□□□□ 0.92
Scn9aQ62205 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Scn9aQ62205 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Scn9aQ62205 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn9aQ62205 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn9aQ62205 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn9aQ62205 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn9aQ62205 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn9aQ62205 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn9aQ62205 Gm45328-201ENSMUST00000210942 917 ntBASIC20.77■□□□□ 0.92
Scn9aQ62205 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scn9aQ62205 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scn9aQ62205 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scn9aQ62205 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.77■□□□□ 0.92
Scn9aQ62205 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scn9aQ62205 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn9aQ62205 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scn9aQ62205 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.76■□□□□ 0.91
Scn9aQ62205 Gm6623-201ENSMUST00000173570 544 ntBASIC20.76■□□□□ 0.91
Scn9aQ62205 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn9aQ62205 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.76■□□□□ 0.91
Scn9aQ62205 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn9aQ62205 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn9aQ62205 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.76■□□□□ 0.91
Scn9aQ62205 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn9aQ62205 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC20.76■□□□□ 0.91
Scn9aQ62205 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scn9aQ62205 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Scn9aQ62205 Gm5712-201ENSMUST00000199748 1043 ntBASIC20.75■□□□□ 0.91
Scn9aQ62205 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.75■□□□□ 0.91
Scn9aQ62205 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Scn9aQ62205 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm13884-201ENSMUST00000118103 829 ntBASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm5864-201ENSMUST00000202263 970 ntBASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Golph3-205ENSMUST00000228671 2842 ntBASIC20.74■□□□□ 0.91
Scn9aQ62205 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gm15794-201ENSMUST00000120182 631 ntBASIC20.74■□□□□ 0.91
Scn9aQ62205 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn9aQ62205 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn9aQ62205 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn9aQ62205 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms