Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.56■□□□□ 0.24
VcanQ62059 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Gm8097-201ENSMUST00000117903 829 ntBASIC16.56■□□□□ 0.24
VcanQ62059 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.56■□□□□ 0.24
VcanQ62059 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.56■□□□□ 0.24
VcanQ62059 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.56■□□□□ 0.24
VcanQ62059 Gm8000-201ENSMUST00000188378 592 ntBASIC16.56■□□□□ 0.24
VcanQ62059 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
VcanQ62059 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VcanQ62059 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
VcanQ62059 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.55■□□□□ 0.24
VcanQ62059 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.55■□□□□ 0.24
VcanQ62059 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.55■□□□□ 0.24
VcanQ62059 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
VcanQ62059 Mir2861-201ENSMUST00000175539 82 ntBASIC16.55■□□□□ 0.24
VcanQ62059 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Gm11355-201ENSMUST00000121120 306 ntBASIC16.55■□□□□ 0.24
VcanQ62059 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.55■□□□□ 0.24
VcanQ62059 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
VcanQ62059 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.55■□□□□ 0.24
VcanQ62059 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.55■□□□□ 0.24
VcanQ62059 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.55■□□□□ 0.24
VcanQ62059 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VcanQ62059 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.54■□□□□ 0.24
VcanQ62059 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
VcanQ62059 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.54■□□□□ 0.24
VcanQ62059 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Mir770-201ENSMUST00000103252 94 ntBASIC16.54■□□□□ 0.24
VcanQ62059 Gm1401-201ENSMUST00000122048 772 ntBASIC16.54■□□□□ 0.24
VcanQ62059 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.54■□□□□ 0.24
VcanQ62059 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Gm7638-201ENSMUST00000121348 967 ntBASIC16.54■□□□□ 0.24
VcanQ62059 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.54■□□□□ 0.24
VcanQ62059 Gm5364-201ENSMUST00000216789 889 ntBASIC16.54■□□□□ 0.24
VcanQ62059 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
VcanQ62059 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.53■□□□□ 0.24
VcanQ62059 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Gm14822-201ENSMUST00000122247 291 ntBASIC16.53■□□□□ 0.24
VcanQ62059 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Gm10060-201ENSMUST00000212002 111 ntBASIC16.53■□□□□ 0.24
VcanQ62059 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.53■□□□□ 0.24
VcanQ62059 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VcanQ62059 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.53■□□□□ 0.24
VcanQ62059 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.53■□□□□ 0.24
VcanQ62059 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
VcanQ62059 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
VcanQ62059 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Gm4995-201ENSMUST00000117247 432 ntBASIC16.52■□□□□ 0.24
VcanQ62059 Gm13127-201ENSMUST00000118978 1389 ntBASIC16.52■□□□□ 0.24
VcanQ62059 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.52■□□□□ 0.24
VcanQ62059 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
VcanQ62059 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.52■□□□□ 0.24
VcanQ62059 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.52■□□□□ 0.24
VcanQ62059 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VcanQ62059 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.52■□□□□ 0.23
VcanQ62059 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.52■□□□□ 0.23
VcanQ62059 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VcanQ62059 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VcanQ62059 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
VcanQ62059 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
VcanQ62059 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.52■□□□□ 0.23
VcanQ62059 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
VcanQ62059 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VcanQ62059 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.51■□□□□ 0.23
VcanQ62059 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms