Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ctr9Q62018 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ctr9Q62018 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Gm9694-201ENSMUST00000193347 1189 ntBASIC20.71■□□□□ 0.91
Ctr9Q62018 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ctr9Q62018 Gm43799-201ENSMUST00000201845 579 ntBASIC20.71■□□□□ 0.91
Ctr9Q62018 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ctr9Q62018 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.71■□□□□ 0.91
Ctr9Q62018 Gm30025-201ENSMUST00000218555 728 ntBASIC20.71■□□□□ 0.91
Ctr9Q62018 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ctr9Q62018 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ctr9Q62018 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.7■□□□□ 0.9
Ctr9Q62018 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Ctr9Q62018 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ctr9Q62018 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.7■□□□□ 0.9
Ctr9Q62018 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ctr9Q62018 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Ctr9Q62018 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.69■□□□□ 0.9
Ctr9Q62018 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.69■□□□□ 0.9
Ctr9Q62018 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.69■□□□□ 0.9
Ctr9Q62018 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.69■□□□□ 0.9
Ctr9Q62018 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Ctr9Q62018 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ctr9Q62018 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ctr9Q62018 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Ctr9Q62018 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.68■□□□□ 0.9
Ctr9Q62018 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ctr9Q62018 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.68■□□□□ 0.9
Ctr9Q62018 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ctr9Q62018 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.68■□□□□ 0.9
Ctr9Q62018 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.67■□□□□ 0.9
Ctr9Q62018 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ctr9Q62018 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ctr9Q62018 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.66■□□□□ 0.9
Ctr9Q62018 Gm11539-201ENSMUST00000119837 557 ntBASIC20.66■□□□□ 0.9
Ctr9Q62018 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Gm13436-201ENSMUST00000120418 567 ntBASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ctr9Q62018 Gm38027-201ENSMUST00000192315 235 ntBASIC20.66■□□□□ 0.9
Ctr9Q62018 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms