Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.74■□□□□ 0.43
Six4Q61321 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.74■□□□□ 0.43
Six4Q61321 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Six4Q61321 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Six4Q61321 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.73■□□□□ 0.43
Six4Q61321 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.73■□□□□ 0.43
Six4Q61321 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Six4Q61321 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC17.73■□□□□ 0.43
Six4Q61321 Gm4974-201ENSMUST00000209974 875 ntBASIC17.73■□□□□ 0.43
Six4Q61321 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Six4Q61321 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.73■□□□□ 0.43
Six4Q61321 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Six4Q61321 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.72■□□□□ 0.43
Six4Q61321 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.72■□□□□ 0.43
Six4Q61321 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.72■□□□□ 0.43
Six4Q61321 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Six4Q61321 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Six4Q61321 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.72■□□□□ 0.43
Six4Q61321 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.72■□□□□ 0.43
Six4Q61321 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.72■□□□□ 0.43
Six4Q61321 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.72■□□□□ 0.43
Six4Q61321 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six4Q61321 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.71■□□□□ 0.43
Six4Q61321 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six4Q61321 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six4Q61321 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six4Q61321 Gm715-201ENSMUST00000117865 831 ntBASIC17.71■□□□□ 0.43
Six4Q61321 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.71■□□□□ 0.43
Six4Q61321 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Six4Q61321 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Six4Q61321 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Six4Q61321 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Six4Q61321 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Six4Q61321 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.7■□□□□ 0.42
Six4Q61321 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.7■□□□□ 0.42
Six4Q61321 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.7■□□□□ 0.42
Six4Q61321 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Six4Q61321 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
Six4Q61321 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Six4Q61321 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Six4Q61321 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.69■□□□□ 0.42
Six4Q61321 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.69■□□□□ 0.42
Six4Q61321 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Six4Q61321 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Six4Q61321 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.69■□□□□ 0.42
Six4Q61321 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.69■□□□□ 0.42
Six4Q61321 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Six4Q61321 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Six4Q61321 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Six4Q61321 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms