Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cacna1eQ61290 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.32■□□□□ 0.36
Cacna1eQ61290 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.32■□□□□ 0.36
Cacna1eQ61290 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cacna1eQ61290 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.32■□□□□ 0.36
Cacna1eQ61290 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Gm17808-201ENSMUST00000200859 894 ntBASIC17.31■□□□□ 0.36
Cacna1eQ61290 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cacna1eQ61290 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.3■□□□□ 0.36
Cacna1eQ61290 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.3■□□□□ 0.36
Cacna1eQ61290 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cacna1eQ61290 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Grk6-206ENSMUST00000224995 2971 ntBASIC17.29■□□□□ 0.36
Cacna1eQ61290 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Cacna1eQ61290 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Actl10-202ENSMUST00000226583 1501 ntBASIC17.29■□□□□ 0.36
Cacna1eQ61290 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cacna1eQ61290 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cacna1eQ61290 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Gm7213-201ENSMUST00000215977 950 ntBASIC17.27■□□□□ 0.36
Cacna1eQ61290 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cacna1eQ61290 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.27■□□□□ 0.35
Cacna1eQ61290 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.27■□□□□ 0.35
Cacna1eQ61290 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.26■□□□□ 0.35
Cacna1eQ61290 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms