Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scnn1aQ61180 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Scnn1aQ61180 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Scnn1aQ61180 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Scnn1aQ61180 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.25■□□□□ 0.83
Scnn1aQ61180 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Scnn1aQ61180 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Gm13474-201ENSMUST00000122466 815 ntBASIC20.24■□□□□ 0.83
Scnn1aQ61180 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.24■□□□□ 0.83
Scnn1aQ61180 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Scnn1aQ61180 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Gm18101-201ENSMUST00000215769 548 ntBASIC20.23■□□□□ 0.83
Scnn1aQ61180 Gm7370-201ENSMUST00000219471 767 ntBASIC20.23■□□□□ 0.83
Scnn1aQ61180 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Scnn1aQ61180 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Scnn1aQ61180 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.22■□□□□ 0.83
Scnn1aQ61180 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scnn1aQ61180 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.2■□□□□ 0.83
Scnn1aQ61180 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Scnn1aQ61180 Gm22697-201ENSMUST00000175194 63 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms