Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.44■□□□□ 0.38
Col12a1Q60847 Gm12350-201ENSMUST00000121208 462 ntBASIC17.44■□□□□ 0.38
Col12a1Q60847 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Gm10060-201ENSMUST00000212002 111 ntBASIC17.44■□□□□ 0.38
Col12a1Q60847 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.44■□□□□ 0.38
Col12a1Q60847 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.44■□□□□ 0.38
Col12a1Q60847 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Col12a1Q60847 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Gm6736-201ENSMUST00000166583 948 ntBASIC17.43■□□□□ 0.38
Col12a1Q60847 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.43■□□□□ 0.38
Col12a1Q60847 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.43■□□□□ 0.38
Col12a1Q60847 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Col12a1Q60847 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Col12a1Q60847 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Gm24841-201ENSMUST00000158676 357 ntBASIC17.42■□□□□ 0.38
Col12a1Q60847 Gm5364-201ENSMUST00000216789 889 ntBASIC17.42■□□□□ 0.38
Col12a1Q60847 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Gm12895-201ENSMUST00000122214 226 ntBASIC17.42■□□□□ 0.38
Col12a1Q60847 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.42■□□□□ 0.38
Col12a1Q60847 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.42■□□□□ 0.38
Col12a1Q60847 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col12a1Q60847 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col12a1Q60847 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col12a1Q60847 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.41■□□□□ 0.38
Col12a1Q60847 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.41■□□□□ 0.38
Col12a1Q60847 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.41■□□□□ 0.38
Col12a1Q60847 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col12a1Q60847 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col12a1Q60847 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.41■□□□□ 0.38
Col12a1Q60847 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col12a1Q60847 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.41■□□□□ 0.38
Col12a1Q60847 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.4■□□□□ 0.38
Col12a1Q60847 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col12a1Q60847 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col12a1Q60847 Fst-202ENSMUST00000223640 2612 ntBASIC17.4■□□□□ 0.38
Col12a1Q60847 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col12a1Q60847 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col12a1Q60847 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col12a1Q60847 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.39■□□□□ 0.37
Col12a1Q60847 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col12a1Q60847 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.39■□□□□ 0.37
Col12a1Q60847 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.39■□□□□ 0.37
Col12a1Q60847 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col12a1Q60847 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col12a1Q60847 Gm8000-201ENSMUST00000188378 592 ntBASIC17.39■□□□□ 0.37
Col12a1Q60847 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col12a1Q60847 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms