Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfaip3Q60769 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Tnfaip3Q60769 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.52■□□□□ 0.23
Tnfaip3Q60769 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.52■□□□□ 0.23
Tnfaip3Q60769 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Tnfaip3Q60769 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Tnfaip3Q60769 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Timm23-208ENSMUST00000226683 750 ntBASIC16.5■□□□□ 0.23
Tnfaip3Q60769 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.5■□□□□ 0.23
Tnfaip3Q60769 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Gm10517-202ENSMUST00000192970 758 ntBASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Gm21814-202ENSMUST00000203277 873 ntBASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Odf3b-204ENSMUST00000227834 930 ntBASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Tnfaip3Q60769 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Tnfaip3Q60769 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Tnfaip3Q60769 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms