Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Gm13889-201ENSMUST00000099689 1386 ntBASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
Trav3-1Q5R1I8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Cdkn3-203ENSMUST00000227149 1952 ntBASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 AC116713.1-201ENSMUST00000215074 430 ntBASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Gm9812-201ENSMUST00000061934 968 ntBASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav3-1Q5R1I8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3-1Q5R1I8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Gm13216-201ENSMUST00000117145 591 ntBASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3-1Q5R1I8 Gm16499-203ENSMUST00000204633 2177 ntBASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3-1Q5R1I8 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3-1Q5R1I8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms