Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Gm13216-201ENSMUST00000117145 591 ntBASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Gm22238-201ENSMUST00000175222 88 ntBASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7d-4Q5R1H9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav7d-4Q5R1H9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Gm38345-201ENSMUST00000192635 1748 ntBASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav7d-4Q5R1H9 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav7d-4Q5R1H9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms