Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav3-3Q5R1C3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3-3Q5R1C3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Gm12922-201ENSMUST00000120626 809 ntBASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 AC154266.1-201ENSMUST00000223190 503 ntBASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav3-3Q5R1C3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.21□□□□□ -0.3
Trav3-3Q5R1C3 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav3-3Q5R1C3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav3-3Q5R1C3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms